Job Submission

example datasets can be downloaded in Tutorial page

Organism


Algorithm

IMPRes v1.0 is for using gene expression only

IMPRes-Pro is for users who have transcriptomics data and proteomics datay


Seed genes

Seed genes format follows the pattern of abst#(KEGG ID or STRING ID), eg.

abst#sce:YOR008C

abst#4932.YOR008C


Target genes

Target genes list folows the pattern of abst#(KEGG ID or STRING ID), eg.

abst#sce:YKR009C

abst#sce:YDL157C

abst#sce:YER059W

abst#sce:YML113W

...


Expression data

Expression data is a tab seperated text file. Fisrt column is the gene ID following the pattern of abst#(KEGG ID or STRING ID). Other columns are gene expression values in different conditions, eg

abst#sce:YLR154C-->0.76-->0.93-->1.00-->1.00-->0.12-->0.42

abst#sce:YKL012W-->0.12-->0.00-->0.16-->0.10-->0.00-->0.13

abst#sce:YJL147C-->1.00-->0.31-->0.00-->1.00-->0.05-->0.65

...

Data type